Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI71208.1 | SAI71212.1 | SAMEA3906486_03410 | SAMEA3906486_03412 | Flagellar hook-length control protein FliK. | Uncharacterised protein. | 0.755 |
SAI71208.1 | arcB | SAMEA3906486_03410 | SAMEA3906486_02480 | Flagellar hook-length control protein FliK. | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.891 |
SAI71208.1 | bvgS_1 | SAMEA3906486_03410 | SAMEA3906486_00421 | Flagellar hook-length control protein FliK. | Virulence sensor protein. | 0.829 |
SAI71208.1 | cph2_2 | SAMEA3906486_03410 | SAMEA3906486_01772 | Flagellar hook-length control protein FliK. | Signalling protein. | 0.611 |
SAI71208.1 | flhB_1 | SAMEA3906486_03410 | SAMEA3906486_03411 | Flagellar hook-length control protein FliK. | Flagellar biosynthesis protein. | 0.929 |
SAI71208.1 | fliD | SAMEA3906486_03410 | SAMEA3906486_03407 | Flagellar hook-length control protein FliK. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.954 |
SAI71208.1 | fliS | SAMEA3906486_03410 | SAMEA3906486_03408 | Flagellar hook-length control protein FliK. | Flagellar protein. | 0.966 |
SAI71208.1 | fliT | SAMEA3906486_03410 | SAMEA3906486_03409 | Flagellar hook-length control protein FliK. | Flagellar protein FliT. | 0.910 |
SAI71208.1 | motB_2 | SAMEA3906486_03410 | SAMEA3906486_03456 | Flagellar hook-length control protein FliK. | Flagellar motor protein MotB. | 0.616 |
SAI71212.1 | SAI71208.1 | SAMEA3906486_03412 | SAMEA3906486_03410 | Uncharacterised protein. | Flagellar hook-length control protein FliK. | 0.755 |
SAI71212.1 | arcB | SAMEA3906486_03412 | SAMEA3906486_02480 | Uncharacterised protein. | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.871 |
SAI71212.1 | bvgS_1 | SAMEA3906486_03412 | SAMEA3906486_00421 | Uncharacterised protein. | Virulence sensor protein. | 0.587 |
SAI71212.1 | cph2_2 | SAMEA3906486_03412 | SAMEA3906486_01772 | Uncharacterised protein. | Signalling protein. | 0.774 |
SAI71212.1 | flhB_1 | SAMEA3906486_03412 | SAMEA3906486_03411 | Uncharacterised protein. | Flagellar biosynthesis protein. | 0.953 |
SAI71212.1 | fliD | SAMEA3906486_03412 | SAMEA3906486_03407 | Uncharacterised protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.846 |
SAI71212.1 | fliS | SAMEA3906486_03412 | SAMEA3906486_03408 | Uncharacterised protein. | Flagellar protein. | 0.868 |
SAI71212.1 | fliT | SAMEA3906486_03412 | SAMEA3906486_03409 | Uncharacterised protein. | Flagellar protein FliT. | 0.789 |
SAI71212.1 | motB_2 | SAMEA3906486_03412 | SAMEA3906486_03456 | Uncharacterised protein. | Flagellar motor protein MotB. | 0.600 |
SAI71212.1 | ydaM_1 | SAMEA3906486_03412 | SAMEA3906486_01918 | Uncharacterised protein. | Membrane protein. | 0.677 |
arcB | SAI71208.1 | SAMEA3906486_02480 | SAMEA3906486_03410 | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Flagellar hook-length control protein FliK. | 0.891 |
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