STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnP_4Inner membrane component of binding-protein-dependent transport system. (213 aa)    
Predicted Functional Partners:
tcyC_2
ABC transporter ATP-binding protein.
  0.998
argT
Extracellular solute-binding protein.
 
  0.990
glnP_3
Binding-protein-dependent transport system inner membrane protein.
 
 
 
0.983
glnH_2
Glutamine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.981
artJ
Amino acid-binding periplasmic protein.
 
  0.967
hisJ
Extracellular substrate-binding protein.
 
  0.964
glnP_2
Binding-protein-dependent transport system inner membrane protein.
 
 
 
0.934
gltL
Glutamate/aspartate transport ATP-binding protein.
 
  0.929
artM_3
Amino acid ABC transporter ATP-binding protein.
 
  0.929
aapP
L-amino acid ABC transporter ATP-binding protein.
 
  0.906
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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