Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aapP | argT | SAMEA3906486_01736 | SAMEA3906486_03802 | L-amino acid ABC transporter ATP-binding protein. | Extracellular solute-binding protein. | 0.522 |
aapP | artJ | SAMEA3906486_01736 | SAMEA3906486_03925 | L-amino acid ABC transporter ATP-binding protein. | Amino acid-binding periplasmic protein. | 0.828 |
aapP | artM_3 | SAMEA3906486_01736 | SAMEA3906486_02579 | L-amino acid ABC transporter ATP-binding protein. | Amino acid ABC transporter ATP-binding protein. | 0.811 |
aapP | glnH_2 | SAMEA3906486_01736 | SAMEA3906486_05471 | L-amino acid ABC transporter ATP-binding protein. | Glutamine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family. | 0.586 |
aapP | glnP_2 | SAMEA3906486_01736 | SAMEA3906486_02580 | L-amino acid ABC transporter ATP-binding protein. | Binding-protein-dependent transport system inner membrane protein. | 0.861 |
aapP | glnP_3 | SAMEA3906486_01736 | SAMEA3906486_03800 | L-amino acid ABC transporter ATP-binding protein. | Binding-protein-dependent transport system inner membrane protein. | 0.836 |
aapP | glnP_4 | SAMEA3906486_01736 | SAMEA3906486_03801 | L-amino acid ABC transporter ATP-binding protein. | Inner membrane component of binding-protein-dependent transport system. | 0.906 |
aapP | hisJ | SAMEA3906486_01736 | SAMEA3906486_02582 | L-amino acid ABC transporter ATP-binding protein. | Extracellular substrate-binding protein. | 0.566 |
argT | aapP | SAMEA3906486_03802 | SAMEA3906486_01736 | Extracellular solute-binding protein. | L-amino acid ABC transporter ATP-binding protein. | 0.522 |
argT | artM_3 | SAMEA3906486_03802 | SAMEA3906486_02579 | Extracellular solute-binding protein. | Amino acid ABC transporter ATP-binding protein. | 0.523 |
argT | glnP_2 | SAMEA3906486_03802 | SAMEA3906486_02580 | Extracellular solute-binding protein. | Binding-protein-dependent transport system inner membrane protein. | 0.964 |
argT | glnP_3 | SAMEA3906486_03802 | SAMEA3906486_03800 | Extracellular solute-binding protein. | Binding-protein-dependent transport system inner membrane protein. | 0.991 |
argT | glnP_4 | SAMEA3906486_03802 | SAMEA3906486_03801 | Extracellular solute-binding protein. | Inner membrane component of binding-protein-dependent transport system. | 0.990 |
argT | gltL | SAMEA3906486_03802 | SAMEA3906486_01633 | Extracellular solute-binding protein. | Glutamate/aspartate transport ATP-binding protein. | 0.521 |
argT | tcyC_2 | SAMEA3906486_03802 | SAMEA3906486_03799 | Extracellular solute-binding protein. | ABC transporter ATP-binding protein. | 0.983 |
artJ | aapP | SAMEA3906486_03925 | SAMEA3906486_01736 | Amino acid-binding periplasmic protein. | L-amino acid ABC transporter ATP-binding protein. | 0.828 |
artJ | artM_3 | SAMEA3906486_03925 | SAMEA3906486_02579 | Amino acid-binding periplasmic protein. | Amino acid ABC transporter ATP-binding protein. | 0.860 |
artJ | glnP_2 | SAMEA3906486_03925 | SAMEA3906486_02580 | Amino acid-binding periplasmic protein. | Binding-protein-dependent transport system inner membrane protein. | 0.854 |
artJ | glnP_3 | SAMEA3906486_03925 | SAMEA3906486_03800 | Amino acid-binding periplasmic protein. | Binding-protein-dependent transport system inner membrane protein. | 0.895 |
artJ | glnP_4 | SAMEA3906486_03925 | SAMEA3906486_03801 | Amino acid-binding periplasmic protein. | Inner membrane component of binding-protein-dependent transport system. | 0.967 |
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