Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI72105.1 | SAI72107.1 | SAMEA3906486_03940 | SAMEA3906486_03941 | Fimbrial protein. | General secretion pathway protein. | 0.842 |
SAI72105.1 | epsE | SAMEA3906486_03940 | SAMEA3906486_03942 | Fimbrial protein. | General secretion pathway ATPase. | 0.862 |
SAI72105.1 | gspF_1 | SAMEA3906486_03940 | SAMEA3906486_02303 | Fimbrial protein. | General secretion pathway protein F. | 0.497 |
SAI72105.1 | gspF_2 | SAMEA3906486_03940 | SAMEA3906486_03516 | Fimbrial protein. | General secretion pathway protein F. | 0.497 |
SAI72105.1 | gspF_3 | SAMEA3906486_03940 | SAMEA3906486_04389 | Fimbrial protein. | General secretion pathway protein F. | 0.497 |
SAI72105.1 | outO | SAMEA3906486_03940 | SAMEA3906486_01757 | Fimbrial protein. | Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.465 |
SAI72107.1 | SAI72105.1 | SAMEA3906486_03941 | SAMEA3906486_03940 | General secretion pathway protein. | Fimbrial protein. | 0.842 |
SAI72107.1 | epsE | SAMEA3906486_03941 | SAMEA3906486_03942 | General secretion pathway protein. | General secretion pathway ATPase. | 0.934 |
SAI72107.1 | gspG_1 | SAMEA3906486_03941 | SAMEA3906486_02309 | General secretion pathway protein. | General secretion pathway protein G. | 0.509 |
SAI72107.1 | gspG_2 | SAMEA3906486_03941 | SAMEA3906486_03506 | General secretion pathway protein. | General secretion pathway protein G. | 0.509 |
SAI72107.1 | outO | SAMEA3906486_03941 | SAMEA3906486_01757 | General secretion pathway protein. | Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.528 |
epsE | SAI72105.1 | SAMEA3906486_03942 | SAMEA3906486_03940 | General secretion pathway ATPase. | Fimbrial protein. | 0.862 |
epsE | SAI72107.1 | SAMEA3906486_03942 | SAMEA3906486_03941 | General secretion pathway ATPase. | General secretion pathway protein. | 0.934 |
epsE | gspF_1 | SAMEA3906486_03942 | SAMEA3906486_02303 | General secretion pathway ATPase. | General secretion pathway protein F. | 0.943 |
epsE | gspF_2 | SAMEA3906486_03942 | SAMEA3906486_03516 | General secretion pathway ATPase. | General secretion pathway protein F. | 0.943 |
epsE | gspF_3 | SAMEA3906486_03942 | SAMEA3906486_04389 | General secretion pathway ATPase. | General secretion pathway protein F. | 0.943 |
epsE | gspG_1 | SAMEA3906486_03942 | SAMEA3906486_02309 | General secretion pathway ATPase. | General secretion pathway protein G. | 0.878 |
epsE | gspG_2 | SAMEA3906486_03942 | SAMEA3906486_03506 | General secretion pathway ATPase. | General secretion pathway protein G. | 0.873 |
epsE | gspL_1 | SAMEA3906486_03942 | SAMEA3906486_02307 | General secretion pathway ATPase. | General secretion pathway protein L. | 0.865 |
epsE | gspL_3 | SAMEA3906486_03942 | SAMEA3906486_04393 | General secretion pathway ATPase. | General secretion pathway protein L. | 0.865 |
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