STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI72223.1Membrane protein. (577 aa)    
Predicted Functional Partners:
norM
Multidrug resistance protein.
 
     0.900
SAI71942.1
Membrane protein.
  
     0.770
ompQ
Outer membrane porin protein OmpQ.
 
     0.766
SAI65461.1
Outer membrane porin protein precursor.
  
     0.761
SAI70395.1
Outer membrane porin protein.
  
     0.755
SAI68797.1
Outer membrane porin protein.
  
     0.754
bph3
DNA-binding protein (histone).
  
     0.751
SAI74817.1
Outer membrane porin protein.
  
     0.745
SAI73765.1
Outer membrane porin protein.
  
     0.743
SAI72432.1
Protein of uncharacterised function (DUF2863).
  
     0.742
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.