STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI72268.1Uncharacterised protein. (109 aa)    
Predicted Functional Partners:
SAI65300.1
Uncharacterized protein conserved in bacteria.
   
    0.938
osmB
Osmotically inducible lipoprotein B.
   
    0.641
cusF
Cation efflux system protein cusF.
   
    0.638
SAI72270.1
Zinc carboxypeptidase.
       0.526
vrg-6
Virulence protein.
   
    0.521
SAI72272.1
Lipoprotein.
       0.507
SAI72265.1
Ferredoxin.
       0.492
nudF
ADP-ribose pyrophosphatase.
       0.492
SAI73229.1
Uncharacterised protein.
   
    0.483
yiaH
Integral membrane protein.
   
    0.481
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.