Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI71693.1 | yadH_2 | SAMEA3906486_03691 | SAMEA3906486_04055 | YcaO-like family. | ABC transporter inner membrane subunit. | 0.653 |
SAI73487.1 | yadH_2 | SAMEA3906486_04660 | SAMEA3906486_04055 | Uncharacterised protein. | ABC transporter inner membrane subunit. | 0.679 |
SAI73487.1 | ybhF_2 | SAMEA3906486_04660 | SAMEA3906486_04659 | Uncharacterised protein. | ABC transporter ATP-binding protein. | 0.613 |
artM_6 | potA_2 | SAMEA3906486_03923 | SAMEA3906486_00850 | Amino acid ABC transporter ATP-binding protein. | ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.568 |
artM_6 | yadH_2 | SAMEA3906486_03923 | SAMEA3906486_04055 | Amino acid ABC transporter ATP-binding protein. | ABC transporter inner membrane subunit. | 0.628 |
gsiA_21 | yadH_2 | SAMEA3906486_05007 | SAMEA3906486_04055 | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | ABC transporter inner membrane subunit. | 0.679 |
hndI | yadH_2 | SAMEA3906486_04056 | SAMEA3906486_04055 | ABC transporter ATP-binding protein. | ABC transporter inner membrane subunit. | 0.989 |
potA_2 | artM_6 | SAMEA3906486_00850 | SAMEA3906486_03923 | ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Amino acid ABC transporter ATP-binding protein. | 0.568 |
potA_2 | ugpE | SAMEA3906486_00850 | SAMEA3906486_05564 | ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Sn-glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | 0.781 |
potA_2 | yadH_2 | SAMEA3906486_00850 | SAMEA3906486_04055 | ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | ABC transporter inner membrane subunit. | 0.793 |
ugpE | potA_2 | SAMEA3906486_05564 | SAMEA3906486_00850 | Sn-glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.781 |
ugpE | yadH_2 | SAMEA3906486_05564 | SAMEA3906486_04055 | Sn-glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | ABC transporter inner membrane subunit. | 0.616 |
yadH_2 | SAI71693.1 | SAMEA3906486_04055 | SAMEA3906486_03691 | ABC transporter inner membrane subunit. | YcaO-like family. | 0.653 |
yadH_2 | SAI73487.1 | SAMEA3906486_04055 | SAMEA3906486_04660 | ABC transporter inner membrane subunit. | Uncharacterised protein. | 0.679 |
yadH_2 | artM_6 | SAMEA3906486_04055 | SAMEA3906486_03923 | ABC transporter inner membrane subunit. | Amino acid ABC transporter ATP-binding protein. | 0.628 |
yadH_2 | gsiA_21 | SAMEA3906486_04055 | SAMEA3906486_05007 | ABC transporter inner membrane subunit. | ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.679 |
yadH_2 | hndI | SAMEA3906486_04055 | SAMEA3906486_04056 | ABC transporter inner membrane subunit. | ABC transporter ATP-binding protein. | 0.989 |
yadH_2 | potA_2 | SAMEA3906486_04055 | SAMEA3906486_00850 | ABC transporter inner membrane subunit. | ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.793 |
yadH_2 | ugpE | SAMEA3906486_04055 | SAMEA3906486_05564 | ABC transporter inner membrane subunit. | Sn-glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | 0.616 |
yadH_2 | ybhF_1 | SAMEA3906486_04055 | SAMEA3906486_00931 | ABC transporter inner membrane subunit. | ABC transporter ATP-binding protein. | 0.910 |
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