Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SAI67364.1 | SAI67773.1 | SAMEA3906486_01471 | SAMEA3906486_01708 | Uncharacterised protein. | Membrane protein. | 0.403 |
| SAI67364.1 | phaP | SAMEA3906486_01471 | SAMEA3906486_02324 | Uncharacterised protein. | Granule-associated protein (phasin). | 0.652 |
| SAI67364.1 | priB | SAMEA3906486_01471 | SAMEA3906486_05041 | Uncharacterised protein. | Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. | 0.704 |
| SAI67364.1 | speE_3 | SAMEA3906486_01471 | SAMEA3906486_04084 | Uncharacterised protein. | Spermidine synthase (putrescine aminopropyltransferase). | 0.687 |
| SAI67773.1 | SAI67364.1 | SAMEA3906486_01708 | SAMEA3906486_01471 | Membrane protein. | Uncharacterised protein. | 0.403 |
| SAI67773.1 | phaP | SAMEA3906486_01708 | SAMEA3906486_02324 | Membrane protein. | Granule-associated protein (phasin). | 0.579 |
| SAI67773.1 | priB | SAMEA3906486_01708 | SAMEA3906486_05041 | Membrane protein. | Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. | 0.505 |
| SAI67773.1 | speE_3 | SAMEA3906486_01708 | SAMEA3906486_04084 | Membrane protein. | Spermidine synthase (putrescine aminopropyltransferase). | 0.636 |
| adiA | lysA | SAMEA3906486_02734 | SAMEA3906486_01253 | Orn/arg/lys decarboxylase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.626 |
| adiA | rocF | SAMEA3906486_02734 | SAMEA3906486_02782 | Orn/arg/lys decarboxylase. | Arginase; Belongs to the arginase family. | 0.932 |
| adiA | speE_3 | SAMEA3906486_02734 | SAMEA3906486_04084 | Orn/arg/lys decarboxylase. | Spermidine synthase (putrescine aminopropyltransferase). | 0.659 |
| fadA6 | speE_3 | SAMEA3906486_04085 | SAMEA3906486_04084 | Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Spermidine synthase (putrescine aminopropyltransferase). | 0.676 |
| fliM | metK | SAMEA3906486_03421 | SAMEA3906486_01385 | Flagellar motor switch protein FliM. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.768 |
| fliM | speE_3 | SAMEA3906486_03421 | SAMEA3906486_04084 | Flagellar motor switch protein FliM. | Spermidine synthase (putrescine aminopropyltransferase). | 0.841 |
| lysA | adiA | SAMEA3906486_01253 | SAMEA3906486_02734 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Orn/arg/lys decarboxylase. | 0.626 |
| lysA | metK | SAMEA3906486_01253 | SAMEA3906486_01385 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.557 |
| lysA | rocF | SAMEA3906486_01253 | SAMEA3906486_02782 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Arginase; Belongs to the arginase family. | 0.758 |
| lysA | speE_3 | SAMEA3906486_01253 | SAMEA3906486_04084 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Spermidine synthase (putrescine aminopropyltransferase). | 0.657 |
| metK | fliM | SAMEA3906486_01385 | SAMEA3906486_03421 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Flagellar motor switch protein FliM. | 0.768 |
| metK | lysA | SAMEA3906486_01385 | SAMEA3906486_01253 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.557 |
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