STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI72365.1Lipoprotein. (324 aa)    
Predicted Functional Partners:
SAI73319.1
Membrane protein.
 
 
  0.804
SAI66205.1
Membrane protein.
 
 
  0.803
SAI69470.1
Membrane protein.
 
 
  0.795
SAI73313.1
Membrane protein.
 
 
  0.794
SAI72364.1
Acyl dehydratase.
 
     0.634
SAI66818.1
Membrane protein.
 
 
  0.608
SAI73320.1
Membrane protein.
  
 
  0.521
SAI66207.1
Membrane protein.
  
 
  0.468
SAI73311.1
Membrane protein.
  
 
  0.433
frc_15
acyl-CoA transferase; Belongs to the CoA-transferase III family.
       0.401
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.