Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI72646.1 | SAI72650.1 | SAMEA3906486_04188 | SAMEA3906486_04190 | Membrane protein. | Esterase/lipase. | 0.684 |
SAI72646.1 | badR | SAMEA3906486_04188 | SAMEA3906486_04189 | Membrane protein. | marR family transcriptional regulator. | 0.684 |
SAI72646.1 | braC_9 | SAMEA3906486_04188 | SAMEA3906486_04191 | Membrane protein. | ABC transporter substrate binding protein. | 0.449 |
SAI72650.1 | SAI72646.1 | SAMEA3906486_04190 | SAMEA3906486_04188 | Esterase/lipase. | Membrane protein. | 0.684 |
SAI72650.1 | badR | SAMEA3906486_04190 | SAMEA3906486_04189 | Esterase/lipase. | marR family transcriptional regulator. | 0.782 |
SAI72650.1 | braC_9 | SAMEA3906486_04190 | SAMEA3906486_04191 | Esterase/lipase. | ABC transporter substrate binding protein. | 0.614 |
badR | SAI72646.1 | SAMEA3906486_04189 | SAMEA3906486_04188 | marR family transcriptional regulator. | Membrane protein. | 0.684 |
badR | SAI72650.1 | SAMEA3906486_04189 | SAMEA3906486_04190 | marR family transcriptional regulator. | Esterase/lipase. | 0.782 |
badR | braC_9 | SAMEA3906486_04189 | SAMEA3906486_04191 | marR family transcriptional regulator. | ABC transporter substrate binding protein. | 0.678 |
braC_9 | SAI72646.1 | SAMEA3906486_04191 | SAMEA3906486_04188 | ABC transporter substrate binding protein. | Membrane protein. | 0.449 |
braC_9 | SAI72650.1 | SAMEA3906486_04191 | SAMEA3906486_04190 | ABC transporter substrate binding protein. | Esterase/lipase. | 0.614 |
braC_9 | badR | SAMEA3906486_04191 | SAMEA3906486_04189 | ABC transporter substrate binding protein. | marR family transcriptional regulator. | 0.678 |