Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI65571.1 | SAI72978.1 | SAMEA3906486_00315 | SAMEA3906486_04388 | Uncharacterised protein. | Phosphate-binding protein. | 0.530 |
SAI72978.1 | SAI65571.1 | SAMEA3906486_04388 | SAMEA3906486_00315 | Phosphate-binding protein. | Uncharacterised protein. | 0.530 |
SAI72978.1 | nudG | SAMEA3906486_04388 | SAMEA3906486_01766 | Phosphate-binding protein. | CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. | 0.478 |
SAI72978.1 | pheT | SAMEA3906486_04388 | SAMEA3906486_05252 | Phosphate-binding protein. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.488 |
SAI72978.1 | phoS | SAMEA3906486_04388 | SAMEA3906486_00330 | Phosphate-binding protein. | Phosphate ABC transporter phosphate-binding periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.786 |
SAI72978.1 | phoU | SAMEA3906486_04388 | SAMEA3906486_01783 | Phosphate-binding protein. | Phosphate transport system protein; Plays a role in the regulation of phosphate uptake. | 0.664 |
SAI72978.1 | prtR2 | SAMEA3906486_04388 | SAMEA3906486_02149 | Phosphate-binding protein. | Transmembrane regulator. | 0.540 |
SAI72978.1 | pstA | SAMEA3906486_04388 | SAMEA3906486_00328 | Phosphate-binding protein. | Phosphate ABC transporter permease. | 0.932 |
SAI72978.1 | pstB | SAMEA3906486_04388 | SAMEA3906486_00327 | Phosphate-binding protein. | Phosphate transport ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.901 |
SAI72978.1 | pstC | SAMEA3906486_04388 | SAMEA3906486_00329 | Phosphate-binding protein. | Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.926 |
SAI72978.1 | wcbR | SAMEA3906486_04388 | SAMEA3906486_05560 | Phosphate-binding protein. | Polyketide synthase. | 0.483 |
nudG | SAI72978.1 | SAMEA3906486_01766 | SAMEA3906486_04388 | CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. | Phosphate-binding protein. | 0.478 |
nudG | phoS | SAMEA3906486_01766 | SAMEA3906486_00330 | CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. | Phosphate ABC transporter phosphate-binding periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.478 |
nudG | wcbR | SAMEA3906486_01766 | SAMEA3906486_05560 | CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. | Polyketide synthase. | 0.561 |
pheT | SAI72978.1 | SAMEA3906486_05252 | SAMEA3906486_04388 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Phosphate-binding protein. | 0.488 |
pheT | phoS | SAMEA3906486_05252 | SAMEA3906486_00330 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Phosphate ABC transporter phosphate-binding periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.488 |
pheT | pstA | SAMEA3906486_05252 | SAMEA3906486_00328 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Phosphate ABC transporter permease. | 0.516 |
phoS | SAI72978.1 | SAMEA3906486_00330 | SAMEA3906486_04388 | Phosphate ABC transporter phosphate-binding periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | Phosphate-binding protein. | 0.786 |
phoS | nudG | SAMEA3906486_00330 | SAMEA3906486_01766 | Phosphate ABC transporter phosphate-binding periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. | 0.478 |
phoS | pheT | SAMEA3906486_00330 | SAMEA3906486_05252 | Phosphate ABC transporter phosphate-binding periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.488 |
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