Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI69036.1 | SAI73081.1 | SAMEA3906486_02254 | SAMEA3906486_04453 | Uncharacterised protein. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.889 |
SAI71110.1 | SAI71550.1 | SAMEA3906486_03360 | SAMEA3906486_03605 | Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. | Uncharacterized protein%2C similar to the N-terminal domain of Lon protease. | 0.599 |
SAI71110.1 | SAI73081.1 | SAMEA3906486_03360 | SAMEA3906486_04453 | Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.797 |
SAI71110.1 | iscS | SAMEA3906486_03360 | SAMEA3906486_03755 | Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.451 |
SAI71550.1 | SAI71110.1 | SAMEA3906486_03605 | SAMEA3906486_03360 | Uncharacterized protein%2C similar to the N-terminal domain of Lon protease. | Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. | 0.599 |
SAI71550.1 | SAI73081.1 | SAMEA3906486_03605 | SAMEA3906486_04453 | Uncharacterized protein%2C similar to the N-terminal domain of Lon protease. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.817 |
SAI73080.1 | SAI73081.1 | SAMEA3906486_04452 | SAMEA3906486_04453 | DNA internalization-related competence protein ComEC/Rec2. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.918 |
SAI73080.1 | SAI73083.1 | SAMEA3906486_04452 | SAMEA3906486_04454 | DNA internalization-related competence protein ComEC/Rec2. | Uncharacterised protein. | 0.907 |
SAI73081.1 | SAI69036.1 | SAMEA3906486_04453 | SAMEA3906486_02254 | Thiazole biosynthesis adenylyltransferase ThiF. | Uncharacterised protein. | 0.889 |
SAI73081.1 | SAI71110.1 | SAMEA3906486_04453 | SAMEA3906486_03360 | Thiazole biosynthesis adenylyltransferase ThiF. | Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. | 0.797 |
SAI73081.1 | SAI71550.1 | SAMEA3906486_04453 | SAMEA3906486_03605 | Thiazole biosynthesis adenylyltransferase ThiF. | Uncharacterized protein%2C similar to the N-terminal domain of Lon protease. | 0.817 |
SAI73081.1 | SAI73080.1 | SAMEA3906486_04453 | SAMEA3906486_04452 | Thiazole biosynthesis adenylyltransferase ThiF. | DNA internalization-related competence protein ComEC/Rec2. | 0.918 |
SAI73081.1 | SAI73083.1 | SAMEA3906486_04453 | SAMEA3906486_04454 | Thiazole biosynthesis adenylyltransferase ThiF. | Uncharacterised protein. | 0.952 |
SAI73081.1 | iscS | SAMEA3906486_04453 | SAMEA3906486_03755 | Thiazole biosynthesis adenylyltransferase ThiF. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.867 |
SAI73081.1 | moaD | SAMEA3906486_04453 | SAMEA3906486_02367 | Thiazole biosynthesis adenylyltransferase ThiF. | Molybdopterin converting factor. | 0.969 |
SAI73081.1 | moaE | SAMEA3906486_04453 | SAMEA3906486_02368 | Thiazole biosynthesis adenylyltransferase ThiF. | Molybdenum cofactor biosynthesis protein E. | 0.937 |
SAI73081.1 | thiG | SAMEA3906486_04453 | SAMEA3906486_01717 | Thiazole biosynthesis adenylyltransferase ThiF. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.949 |
SAI73081.1 | thiS | SAMEA3906486_04453 | SAMEA3906486_02909 | Thiazole biosynthesis adenylyltransferase ThiF. | Thiamin biosynthesis ThiS. | 0.980 |
SAI73083.1 | SAI73080.1 | SAMEA3906486_04454 | SAMEA3906486_04452 | Uncharacterised protein. | DNA internalization-related competence protein ComEC/Rec2. | 0.907 |
SAI73083.1 | SAI73081.1 | SAMEA3906486_04454 | SAMEA3906486_04453 | Uncharacterised protein. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.952 |
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