STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB4Type IV secretion system protein VirB4. (813 aa)    
Predicted Functional Partners:
virB8
Type IV secretion system protein VirB8.
 
 
 0.998
virB10
Type IV secretion system protein VirB10.
 
 
 0.995
virB9
Type IV secretion system protein VirB9.
 
 
 0.992
virB3
Type IV secretion system protein VirB3.
  
 
 0.977
trwI
Trwi protein.
 
 
 0.973
virB1
Type IV secretion system protein VirB1.
 
   
 0.913
SAI67261.1
Predicted integral membrane protein.
   
    0.859
virB5
Plasmid-related exported protein.
    
 0.839
bscU
Type III secretion protein.
   
  
 0.833
SAI70011.1
Uncharacterised protein.
   
  
 0.824
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.