STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI73542.1LysR family transcriptional regulator. (255 aa)    
Predicted Functional Partners:
traF1_7
Conjugal transfer protein TraF.
       0.773
SAI73545.1
Transposon.
       0.773
SAI73546.1
Uncharacterised protein.
       0.773
soj_8
Partition protein.
       0.773
dmlR_4
LysR family transcriptional regulator.
  
     0.768
dmlR_25
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.750
dmlR_14
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.739
dmlR_19
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.736
dmlR_30
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.733
dmlR_9
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.732
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.