Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
adrA_1 | pleD | SAMEA3906486_00419 | SAMEA3906486_03374 | Signaling protein. | Membrane protein. | 0.422 |
adrA_1 | ycdT_1 | SAMEA3906486_00419 | SAMEA3906486_00528 | Signaling protein. | Membrane protein. | 0.427 |
adrA_1 | ycdT_2 | SAMEA3906486_00419 | SAMEA3906486_00600 | Signaling protein. | Signaling membrane protein. | 0.415 |
adrA_1 | ycdT_3 | SAMEA3906486_00419 | SAMEA3906486_01041 | Signaling protein. | Signaling protein. | 0.449 |
adrA_1 | ycgG_1 | SAMEA3906486_00419 | SAMEA3906486_04964 | Signaling protein. | Signaling protein. | 0.770 |
adrA_1 | ydaM_1 | SAMEA3906486_00419 | SAMEA3906486_01918 | Signaling protein. | Membrane protein. | 0.444 |
dosC_1 | ycdT_1 | SAMEA3906486_04199 | SAMEA3906486_00528 | Signaling protein. | Membrane protein. | 0.418 |
dosC_1 | ycdT_3 | SAMEA3906486_04199 | SAMEA3906486_01041 | Signaling protein. | Signaling protein. | 0.426 |
dosC_1 | ycgG_1 | SAMEA3906486_04199 | SAMEA3906486_04964 | Signaling protein. | Signaling protein. | 0.775 |
dosC_1 | ydaM_1 | SAMEA3906486_04199 | SAMEA3906486_01918 | Signaling protein. | Membrane protein. | 0.434 |
pleD | adrA_1 | SAMEA3906486_03374 | SAMEA3906486_00419 | Membrane protein. | Signaling protein. | 0.422 |
pleD | wspR_1 | SAMEA3906486_03374 | SAMEA3906486_02751 | Membrane protein. | Signaling/response regulator protein. | 0.421 |
pleD | ycdT_3 | SAMEA3906486_03374 | SAMEA3906486_01041 | Membrane protein. | Signaling protein. | 0.401 |
pleD | ycgG_1 | SAMEA3906486_03374 | SAMEA3906486_04964 | Membrane protein. | Signaling protein. | 0.771 |
pleD | ydaM_1 | SAMEA3906486_03374 | SAMEA3906486_01918 | Membrane protein. | Membrane protein. | 0.422 |
pleD | yeaP_3 | SAMEA3906486_03374 | SAMEA3906486_05342 | Membrane protein. | Signalling protein. | 0.428 |
wspR_1 | pleD | SAMEA3906486_02751 | SAMEA3906486_03374 | Signaling/response regulator protein. | Membrane protein. | 0.421 |
wspR_1 | ycdT_1 | SAMEA3906486_02751 | SAMEA3906486_00528 | Signaling/response regulator protein. | Membrane protein. | 0.427 |
wspR_1 | ycdT_2 | SAMEA3906486_02751 | SAMEA3906486_00600 | Signaling/response regulator protein. | Signaling membrane protein. | 0.421 |
wspR_1 | ycdT_3 | SAMEA3906486_02751 | SAMEA3906486_01041 | Signaling/response regulator protein. | Signaling protein. | 0.441 |
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