Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI66350.1 | SAI74431.1 | SAMEA3906486_00917 | SAMEA3906486_05158 | Membrane protein. | Peptidase inhibitor. | 0.469 |
SAI66350.1 | pbp | SAMEA3906486_00917 | SAMEA3906486_05159 | Membrane protein. | Penicillin-binding protein. | 0.596 |
SAI66499.1 | pbp | SAMEA3906486_01002 | SAMEA3906486_05159 | Low-specificity D-threonine aldolase. | Penicillin-binding protein. | 0.641 |
SAI74431.1 | SAI66350.1 | SAMEA3906486_05158 | SAMEA3906486_00917 | Peptidase inhibitor. | Membrane protein. | 0.469 |
SAI74431.1 | clpA | SAMEA3906486_05158 | SAMEA3906486_05160 | Peptidase inhibitor. | ATP-dependent clp protease ATP-binding; Belongs to the ClpA/ClpB family. | 0.617 |
SAI74431.1 | pbp | SAMEA3906486_05158 | SAMEA3906486_05159 | Peptidase inhibitor. | Penicillin-binding protein. | 0.974 |
clpA | SAI74431.1 | SAMEA3906486_05160 | SAMEA3906486_05158 | ATP-dependent clp protease ATP-binding; Belongs to the ClpA/ClpB family. | Peptidase inhibitor. | 0.617 |
clpA | pbp | SAMEA3906486_05160 | SAMEA3906486_05159 | ATP-dependent clp protease ATP-binding; Belongs to the ClpA/ClpB family. | Penicillin-binding protein. | 0.747 |
dacB | ftsI | SAMEA3906486_00452 | SAMEA3906486_00710 | D-alanyl-D-alanine carboxypeptidase. | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.668 |
dacB | mrcA_1 | SAMEA3906486_00452 | SAMEA3906486_01255 | D-alanyl-D-alanine carboxypeptidase. | Penicillin-binding protein 1A. | 0.707 |
dacB | mrcA_2 | SAMEA3906486_00452 | SAMEA3906486_05322 | D-alanyl-D-alanine carboxypeptidase. | Penicillin-binding protein. | 0.701 |
dacB | mrdA | SAMEA3906486_00452 | SAMEA3906486_03052 | D-alanyl-D-alanine carboxypeptidase. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.703 |
dacB | mtgA | SAMEA3906486_00452 | SAMEA3906486_04234 | D-alanyl-D-alanine carboxypeptidase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.898 |
dacB | pbp | SAMEA3906486_00452 | SAMEA3906486_05159 | D-alanyl-D-alanine carboxypeptidase. | Penicillin-binding protein. | 0.665 |
ftsI | dacB | SAMEA3906486_00710 | SAMEA3906486_00452 | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | D-alanyl-D-alanine carboxypeptidase. | 0.668 |
ftsI | mrcA_1 | SAMEA3906486_00710 | SAMEA3906486_01255 | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Penicillin-binding protein 1A. | 0.912 |
ftsI | mrcA_2 | SAMEA3906486_00710 | SAMEA3906486_05322 | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Penicillin-binding protein. | 0.906 |
ftsI | mrdA | SAMEA3906486_00710 | SAMEA3906486_03052 | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.942 |
ftsI | mtgA | SAMEA3906486_00710 | SAMEA3906486_04234 | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.980 |
ftsI | pbp | SAMEA3906486_00710 | SAMEA3906486_05159 | Peptidoglycan synthetase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Penicillin-binding protein. | 0.713 |
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