STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yagS_2Xanthine dehydrogenase. (329 aa)    
Predicted Functional Partners:
yagR_2
Xanthine dehydrogenase yagR molybdenum binding subunit.
 0.999
yagT_2
Xanthine dehydrogenase.
 
 0.997
yagR_1
Xanthine dehydrogenase yagR molybdenum binding subunit.
 0.995
yagT_1
Xanthine dehydrogenase.
 
 0.993
cutL
Oxidoreductase large subunit.
 0.983
cutS
Iron-sulfur binding protein.
 
 0.973
iorA
Oxidoreductase.
 
 0.911
iorA1
Isoquinoline 1-oxidoreductase subunit alpha.
 
 0.904
SAI65272.1
Aldehyde dehydrogenase.
 
 0.848
SAI70980.1
Xanthine dehydrogenase accessory protein XdhC.
 
 
 0.846
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.