STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EI16_00225Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)    
Predicted Functional Partners:
EI16_09895
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
EI16_00335
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.990
EI16_03970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
EI16_06410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
cheB
Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.973
EI16_05175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
EI16_08065
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
EI16_08310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
EI16_06255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.965
EI16_11080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.964
Your Current Organism:
Hydrogenovibrio marinus
NCBI taxonomy Id: 28885
Other names: DSM 11271, H. marinus, Hydrogenivibrio marinus, JCM 7688, strain MH-110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.