STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MotA_2Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)    
Predicted Functional Partners:
EI16_03610
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
MotB_1
OmpA/MotB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.979
EI16_03185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.964
MotB_2
OmpA/MotB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.944
EI16_05355
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
EI16_05360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
MotA_3
Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.918
flgG
Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.900
MotA_1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
EI16_10235
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
Your Current Organism:
Hydrogenovibrio marinus
NCBI taxonomy Id: 28885
Other names: DSM 11271, H. marinus, Hydrogenivibrio marinus, JCM 7688, strain MH-110
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.