STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhoBChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
EI16_03185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
PhoR
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
EI16_08705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
EI16_03395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.886
EI16_08305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.881
EI16_06960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.857
EI16_07520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.842
EI16_06650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.841
EI16_07205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.830
EI16_11350
PhoU family transcriptional regulator; Plays a role in the regulation of phosphate uptake.
 
  
 0.824
Your Current Organism:
Hydrogenovibrio marinus
NCBI taxonomy Id: 28885
Other names: DSM 11271, H. marinus, Hydrogenivibrio marinus, JCM 7688, strain MH-110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.