STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EI16_12525Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
EI16_12535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.957
EI16_12520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
EI16_12515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
 
     0.945
EI16_12565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.830
EI16_12580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.824
EI16_12570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
EI16_12595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
EI16_12530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
EI16_12635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.769
EI16_12630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.693
Your Current Organism:
Hydrogenovibrio marinus
NCBI taxonomy Id: 28885
Other names: DSM 11271, H. marinus, Hydrogenivibrio marinus, JCM 7688, strain MH-110
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.