STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EJG05983.1PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: mpi:Mpet_2249 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: CMP/dCMP deaminase zinc-binding protein. (144 aa)    
Predicted Functional Partners:
EJG06902.1
PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: mpl:Mpal_0504 carbonate dehydratase; PFAM: Carbonic anhydrase; SPTR: Carbonate dehydratase.
  
 
 0.804
EJG05982.1
PFAM: Leucine carboxyl methyltransferase; KEGG: pvi:Cvib_1264 polyketide biosynthesis O-methyltransferase; SPTR: O-methyltransferase involved in polyketide biosynthesis.
       0.773
EJG06280.1
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: mpi:Mpet_0043 cupin 2 conserved barrel domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein.
 
      0.675
hpt
Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family. Archaeal HPRT subfamily.
     
 0.611
EJG06758.1
PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: mhu:Mhun_1811 formate/nitrite transporter; PFAM: Formate/nitrite transporter; SPTR: Formate/nitrite transporter.
 
   
 0.581
EJG07044.1
KEGG: mla:Mlab_0376 chaperonin GroEL; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
     
 0.527
EJG06676.1
Hexapeptide repeat-containing transferase; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: mem:Memar_1692 hexapaptide repeat-containing transferase; SPTR: Transferase hexapeptide repeat containing protein.
     
 0.525
EJG07046.1
PFAM: ABC transporter; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mpl:Mpal_1075 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
     
 0.517
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
       0.505
EJG06400.1
Thymidine phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
     
  0.499
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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