STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG05988.1KEGG: mem:Memar_0788 hypothetical protein; SPTR: Putative uncharacterized protein. (79 aa)    
Predicted Functional Partners:
EJG06483.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1743); TIGRFAM: putative methanogenesis marker protein 11; COGs: COG1571 DNA-binding protein containing a Zn-ribbon domain; KEGG: mem:Memar_0629 hypothetical protein; SPTR: tRNA(Ile2) 2-agmatinylcytidine synthetase.
  
     0.619
EJG06725.1
PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: mem:Memar_0954 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein.
  
     0.551
EJG05987.1
SMC domain protein; COGs: COG4637 ATPase; InterPro IPR003395; KEGG: tna:CTN_0047 ATPase-like protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: ATPase-like protein.
       0.548
EJG05986.1
KEGG: tna:CTN_0048 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.540
EJG05985.1
KEGG: mem:Memar_2292 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.527
EJG06831.1
MgtE integral membrane region; PFAM: Divalent cation transporter; COGs: COG1824 Permease similar to cation transporter; InterPro IPR006667; KEGG: mem:Memar_1553 MgtE integral membrane region; PFAM: MgtE integral membrane region; SPTR: MgtE integral membrane region.
 
     0.483
EJG07111.1
PFAM: Bacterial Ig-like domain (group 2); InterPro IPR003343; KEGG: mpl:Mpal_1812 PKD domain containing protein; PFAM: Bacterial Ig-like, group 2; SMART: Bacterial Ig-like, group 2; SPTR: PKD domain containing protein.
  
     0.473
EJG07908.1
Protein of unknown function DUF107; PFAM: NfeD-like; InterPro IPR002810; KEGG: mem:Memar_0501 hypothetical protein; PFAM: Nodulation efficiency, NfeD; SPTR: Putative uncharacterized protein.
  
     0.472
EJG06366.1
Methanogenesis marker protein 17; PFAM: Uncharacterized protein conserved in archaea (DUF2113); TIGRFAM: putative methanogenesis marker protein 17; COGs: COG4051 conserved hypothetical protein; InterPro IPR016762; KEGG: mem:Memar_2060 hypothetical protein; PFAM: Uncharacterised conserved protein UCP019464, methanogenesis; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised conserved protein UCP019464, methanogenesis.
  
     0.457
EJG07781.1
PFAM: PEGA domain; Protein of unknown function (DUF3344); InterPro IPR013229; KEGG: mpi:Mpet_0024 PEGA domain-containing protein; PFAM: PEGA; SPTR: PEGA domain protein.
  
     0.431
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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