STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06062.1Ribonuclease III; PFAM: RNase3 domain; InterPro IPR000999; KEGG: mem:Memar_1710 ribonuclease III; PFAM: Ribonuclease III; SPTR: Ribonuclease III. (235 aa)    
Predicted Functional Partners:
EJG06061.1
KEGG: swo:Swol_2188 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.550
EJG06063.1
Hypothetical protein.
       0.523
EJG06060.1
PFAM: Ribosomal protein S24e; KEGG: mpi:Mpet_0868 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.424
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.