STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06067.1PFAM: Cupin domain; InterPro IPR013096; KEGG: mem:Memar_0351 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, conserved barrel domain protein. (110 aa)    
Predicted Functional Partners:
EJG06068.1
PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterPro IPR004137:IPR010047; KEGG: mma:MM_2301 carbon monoxide dehydrogenase; PFAM: Prismane; SPTR: Carbon monoxide dehydrogenase 2; TIGRFAM: Carbon-monoxide dehydrogenase, catalytic subunit; manually curated.
       0.570
EJG08277.1
PFAM: Prephenate dehydratase; ACT domain; COGs: COG0077 Prephenate dehydratase; InterPro IPR001086:IPR002912; KEGG: mem:Memar_1299 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; SPTR: Prephenate dehydratase.
  
 
 0.485
EJG07109.1
PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362:IPR019468:IPR004769; KEGG: mpi:Mpet_1919 adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.450
EJG06280.1
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: mpi:Mpet_0043 cupin 2 conserved barrel domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein.
  
 0.435
EJG07031.1
PFAM: Cupin domain; InterPro IPR013096; KEGG: mpi:Mpet_1624 cupin 2 conserved barrel domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.
  
 0.435
EJG07060.1
PFAM: Cupin domain; InterPro IPR013096; KEGG: mem:Memar_1350 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, conserved barrel domain protein.
  
 0.435
EJG07023.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: mma:MM_1902 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein.
  
 
 0.423
EJG06508.1
CheC, inhibitor of MCP methylation; PFAM: CheC-like family; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: mpi:Mpet_1206 MCP methylation inhibitor CheC; PFAM: CheC-like protein; SPTR: CheC, inhibitor of MCP methylation.
    
   0.420
EJG07202.1
CheC, inhibitor of MCP methylation; PFAM: CheC-like family; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: mpl:Mpal_1855 CheC, inhibitor of MCP methylation; PFAM: CheC-like protein; SPTR: CheC, inhibitor of MCP methylation.
    
   0.420
EJG06069.1
PFAM: Sugar-specific transcriptional regulator TrmB; COGs: COG1378 transcriptional regulator protein; InterPro IPR002831; KEGG: mem:Memar_1209 transcriptional regulator, TrmB; PFAM: Transcriptional regulator TrmB; SPTR: Transcriptional regulator, TrmB.
       0.415
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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