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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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EJG06079.1Putative PAS/PAC sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014:IPR003661:IPR013656; KEGG: geb:GM18_3556 putative PAS/PAC sensor protein; PFAM: PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS. (585 aa)    
Predicted Functional Partners:
EJG06080.1
PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: mbn:Mboo_0056 aspartate aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, class I and II.
     
 0.747
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.746
EJG07113.1
Putative PAS/PAC sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR013655:IPR013656:IPR000014; KEGG: mmg:MTBMA_c12200 sensory transduction histidine kinase; PFAM: PAS fold-3; PAS fold-4; SMART: PAS; SPTR: Predicted sensory transduction histidine kinase; TIGRFAM: PAS.
 
  
 0.654
EJG08266.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003594:IPR013655:IPR 013656; KEGG: mpi:Mpet_2338 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-4; PAS fold-3; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS.
 
  
 0.609
EJG06083.1
PFAM: Aminotransferase class-V; COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: mem:Memar_0056 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Phosphoserine aminotransferase apoenzyme / L-aspartate aminotransferase apoenzyme.
  
  
 0.595
EJG07355.1
Protein serine/threonine phosphatase; PFAM: 5TMR of 5TMR-LYT; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932:IPR011620:IPR010822; KEGG: mem:Memar_2468 stage II sporulation E family protein; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; SMART: Protein phosphatase 2C-related; SPTR: Stage II sporulation E family protein.
 
 0.592
EJG06082.1
Riboflavin synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: riboflavin synthase; COGs: COG1731 riboflavin synthase; InterPro IPR002180:IPR006399; KEGG: mpi:Mpet_0320 riboflavin synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: Riboflavin synthase; TIGRFAM: Riboflavin synthase, archaeal.
       0.590
EJG06078.1
PFAM: Protein of unknown function (DUF2703); KEGG: mpl:Mpal_1819 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.580
EJG08392.1
CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207:IPR003594:IPR002545:IPR001789; KEGG: mem:Memar_0238 CheA signal transduction histidine kinases; PFAM: Signal transduction response regulator, receiver region; CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, recei [...]
  
  
  0.571
EJG06183.1
PFAM: Cache domain; HAMP domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003660:IPR001932:IPR004010:IPR010822; KEGG: mbn:Mboo_0643 stage II sporulation E family protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; Cache; SMART: Protein phosphatase 2C-related; HAMP linker domain; SPTR: Stage II sporulation E family protein.
 
 
 0.546
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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