STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06089.1PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mem:Memar_0050 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase. (183 aa)    
Predicted Functional Partners:
EJG06088.1
PFAM: Domain of unknown function DUF123; COGs: COG1833 conserved hypothetical protein; InterPro IPR002837; KEGG: mba:Mbar_A0396 endonuclease III; PFAM: Protein of unknown function DUF123; SPTR: Endonuclease III.
       0.791
EJG06087.1
Beta-lactamase domain-containing protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: mem:Memar_0052 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein.
       0.774
EJG08261.1
PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mem:Memar_0166 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase.
  
     0.735
EJG06086.1
PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: mem:Memar_0053 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Hydroxymethylpyrimidine synthase; TIGRFAM: Thiamine biosynthesis protein ThiC.
       0.569
EJG06438.1
Protein of unknown function DUF106 transmembrane; PFAM: Integral membrane protein DUF106; COGs: COG1422 membrane protein; InterPro IPR002809; KEGG: mem:Memar_0589 hypothetical protein; PFAM: Protein of unknown function DUF106, transmembrane; SPTR: Putative uncharacterized protein.
   
    0.418
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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