STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06180.1KEGG: mla:Mlab_1323 hypothetical protein; SPTR: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase. (402 aa)    
Predicted Functional Partners:
EJG06925.1
KEGG: mhu:Mhun_2587 membrane bound hydrogenase, MbhI subunit; SPTR: Membrane bound hydrogenase subunit mbhI.
  
     0.588
EJG06301.1
Cache type 2 domain protein; PFAM: Cache domain; InterPro IPR013163; KEGG: mpl:Mpal_1445 putative cache sensor protein; PFAM: Cache, type 2; SPTR: Putative cache sensor protein.
  
     0.553
EJG07569.1
GHMP kinase; TIGRFAM: beta-RFAP synthase; COGs: COG1907 sugar kinase; KEGG: mem:Memar_1082 GHMP kinase; SPTR: GHMP kinase.
  
     0.543
EJG06636.1
KEGG: mem:Memar_0520 methyl-accepting chemotaxis protein; SPTR: Methyl-accepting chemotaxis protein.
  
     0.513
EJG08210.1
PFAM: Protein of unknown function (DUF3089); KEGG: mla:Mlab_1707 DNA repair and recombination protein RadA; SPTR: Putative uncharacterized protein.
  
     0.481
EJG06181.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mbn:Mboo_1289 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
       0.469
EJG06182.1
KEGG: mbn:Mboo_1290 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.469
EJG08186.1
Hypothetical protein; TIGRFAM: Chlamydial polymorphic outer membrane protein repeat; KEGG: mla:Mlab_1452 hypothetical protein; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.465
EJG08297.1
PFAM: OB-fold nucleic acid binding domain; COGs: COG1599 Single-stranded DNA-binding replication protein A (RPA) large (70 kD) subunit and related ssDNA-binding protein; InterPro IPR004365; KEGG: mhu:Mhun_2542 nucleic acid binding, OB-fold, tRNA/helicase-type; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Nucleic acid binding, OB-fold, tRNA/helicase-type.
  
     0.450
EJG08397.1
Putative cache sensor protein; PFAM: Cache domain; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: mma:MM_0729 hypothetical protein; PFAM: Cache, type 2; SPTR: Conserved protein.
  
     0.448
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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