Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG06211.1Transposase IS200-family protein; PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: tko:TK0932 IS200-like transposase; PFAM: Transposase IS200-like; SPTR: IS200-like transposase. (135 aa)    
Predicted Functional Partners:
EJG06210.1
Transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: mtp:Mthe_1117 IS605 family transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal.
 
   
 0.972
EJG07653.1
Transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: mmh:Mmah_2005 transposase, IS605 OrfB family; PFAM: Transposase, IS605 OrfB, C-terminal; SPTR: Transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal.
 
   
 0.736
EJG06212.1
PFAM: Sodium/hydrogen exchanger family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: mpi:Mpet_0119 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; SPTR: Sodium/hydrogen exchanger.
       0.450
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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