STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06301.1Cache type 2 domain protein; PFAM: Cache domain; InterPro IPR013163; KEGG: mpl:Mpal_1445 putative cache sensor protein; PFAM: Cache, type 2; SPTR: Putative cache sensor protein. (193 aa)    
Predicted Functional Partners:
EJG08392.1
CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207:IPR003594:IPR002545:IPR001789; KEGG: mem:Memar_0238 CheA signal transduction histidine kinases; PFAM: Signal transduction response regulator, receiver region; CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, recei [...]
  
 
 0.955
EJG07535.1
Putative PAS/PAC sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR001789:IPR013767:IPR013655:IPR 001610; KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; Signal transduction response regulator, receiver region; PAS fold; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS.
  
  
 0.928
EJG07113.1
Putative PAS/PAC sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR013655:IPR013656:IPR000014; KEGG: mmg:MTBMA_c12200 sensory transduction histidine kinase; PFAM: PAS fold-3; PAS fold-4; SMART: PAS; SPTR: Predicted sensory transduction histidine kinase; TIGRFAM: PAS.
    
 0.927
EJG06003.1
PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: mpi:Mpet_0205 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: CheW protein.
  
 0.835
EJG08285.1
PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: mpi:Mpet_1620 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: CheW protein.
  
 0.835
EJG08394.1
PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: mem:Memar_0240 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: Putative CheW protein.
  
 0.835
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.730
EJG07208.1
MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: mem:Memar_1545 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type; SPTR: Protein-glutamate O-methyltransferase.
 
 0.708
EJG06509.1
PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mpl:Mpal_2247 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.
  
 0.580
EJG07199.1
PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mpl:Mpal_1858 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein.
  
 0.580
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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