STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06307.1KEGG: mem:Memar_1104 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (176 aa)    
Predicted Functional Partners:
EJG06308.1
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: mem:Memar_1105 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; SPTR: Transcriptional modulator of MazE/toxin, MazF.
  
    0.793
EJG06331.1
Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006674:IPR003607; KEGG: mem:Memar_2141 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase.
  
   0.783
EJG06306.1
PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mem:Memar_1103 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family.
       0.781
EJG06304.1
PFAM: YcfA-like protein; COGs: COG1724 periplasmic or secreted lipoprotein; InterPro IPR012933; KEGG: mpi:Mpet_0478 YcfA family protein; PFAM: YcfA-like; SPTR: Putative uncharacterized protein; manually curated.
       0.543
EJG06305.1
PFAM: Uncharacterised protein family (UPF0150); manually curated.
       0.543
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.