STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06335.1PFAM: DGC domain; COGs: COG4273 conserved hypothetical protein; InterPro IPR014958; KEGG: mem:Memar_0020 hypothetical protein; PFAM: DGC; SPTR: Putative uncharacterized protein. (154 aa)    
Predicted Functional Partners:
EJG06336.1
KEGG: mem:Memar_2479 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.534
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.514
EJG08137.1
Protein of unknown function DUF318, transmembrane; PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: mpi:Mpet_0354 permease; PFAM: Protein of unknown function DUF318, transmembrane; SPTR: Permease.
 
  
 0.505
EJG08117.1
PFAM: Glutamine amidotransferases class-II; COGs: COG0067 Glutamate synthase domain 1; InterPro IPR000583; KEGG: mpl:Mpal_2710 glutamine amidotransferase class-II; PFAM: Glutamine amidotransferase, class-II; SPTR: Glutamine amidotransferase class-II.
  
  
  0.500
EJG08020.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027; KEGG: mbn:Mboo_2329 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.475
EJG06337.1
KEGG: mem:Memar_2478 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.463
EJG08138.1
Protein of unknown function DUF318, transmembrane; PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: mem:Memar_0015 permease; PFAM: Protein of unknown function DUF318, transmembrane; SPTR: Permease.
  
  
 0.450
EJG06511.1
Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: mpi:Mpet_0105 flavodoxin/nitric oxide synthase; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Flavodoxin/nitric oxide synthase.
   
  
 0.446
EJG07801.1
PFAM: Metallo-beta-lactamase superfamily; COGs: COG0426 flavoprotein; KEGG: mem:Memar_1933 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein.
   
  
 0.446
EJG08396.1
PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: mac:MA3914 hypothetical protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.