STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06387.1Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mbn:Mboo_2291 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11. (284 aa)    
Predicted Functional Partners:
EJG06386.1
Methyltransferase type 12; InterPro IPR013217; KEGG: mem:Memar_2275 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12.
       0.605
EJG06388.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR000014:IPR013656:IPR003594; KEGG: mpi:Mpet_2819 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-4; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; PAS; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS.
       0.438
EJG06385.1
Hypothetical protein.
       0.435
EJG06357.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mem:Memar_0330 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.
  
     0.422
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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