STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06408.1PFAM: Tubulin/FtsZ family, GTPase domain; COGs: COG0206 Cell division GTPase; InterPro IPR003008; KEGG: mem:Memar_0556 cell division GTPase-like protein; PFAM: Tubulin/FtsZ, GTPase domain; SPTR: Cell division GTPase-like protein. (607 aa)    
Predicted Functional Partners:
EJG06252.1
Phospholipase D/transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: mem:Memar_2448 phospholipase D/transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase.
  
  
 0.724
EJG08249.1
PFAM: Protein of unknown function (DUF552); COGs: COG2450 conserved hypothetical protein; InterPro IPR012426; KEGG: mpl:Mpal_0398 protein of unknown function DUF1621; PFAM: Protein of unknown function DUF1621; SPTR: Putative uncharacterized protein.
  
 
 0.706
EJG07156.1
KEGG: mem:Memar_0938 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.691
EJG07526.1
Hypothetical protein; PFAM: CARDB; KEGG: mem:Memar_1820 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.663
EJG08344.1
PFAM: Oligosaccharyl transferase STT3 subunit; COGs: COG1287 membrane protein required for N-linked glycosylation; InterPro IPR003674; KEGG: mem:Memar_2235 oligosaccharyl transferase, STT3 subunit; PFAM: Oligosaccharyl transferase, STT3 subunit; SPTR: Oligosaccharyl transferase, STT3 subunit.
  
   
 0.660
EJG06883.1
Protein of unknown function UPF0058; PFAM: Uncharacterised protein family UPF0058; COGs: COG1745 metal-binding protein; InterPro IPR002753; KEGG: mem:Memar_1016 hypothetical protein; PFAM: Uncharacterised protein family UPF0058; SPTR: Putative uncharacterized protein.
  
    0.653
dtdA
D-tyrosyl-tRNA(Tyr) deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo.
 
     0.651
EJG07702.1
PFAM: DHHA1 domain; COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: mem:Memar_2015 phosphoesterase, DHHA1; PFAM: Phosphoesterase, DHHA1; SPTR: Phosphoesterase, DHHA1.
  
     0.646
EJG06076.1
KEGG: mem:Memar_0063 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.632
EJG08297.1
PFAM: OB-fold nucleic acid binding domain; COGs: COG1599 Single-stranded DNA-binding replication protein A (RPA) large (70 kD) subunit and related ssDNA-binding protein; InterPro IPR004365; KEGG: mhu:Mhun_2542 nucleic acid binding, OB-fold, tRNA/helicase-type; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Nucleic acid binding, OB-fold, tRNA/helicase-type.
  
     0.624
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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