STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06448.1PFAM: Domain of unknown function (DUF362); COGs: COG2006 conserved hypothetical protein; InterPro IPR007160:IPR001450; KEGG: mpl:Mpal_1943 protein of unknown function DUF362; PFAM: Protein of unknown function DUF362; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein. (377 aa)    
Predicted Functional Partners:
EJG07870.1
PFAM: 4Fe-4S binding domain; COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR001450; KEGG: rci:RRC203 2(4Fe-4S) ferredoxin-domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 2(4Fe-4S) ferredoxin-domain protein.
 
     0.560
EJG06446.1
Protein of unknown function DUF2207, membrane; PFAM: Predicted membrane protein (DUF2207); COGs: COG4907 membrane protein; InterPro IPR018702; KEGG: mem:Memar_2464 hypothetical protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: Putative uncharacterized protein.
       0.548
EJG06447.1
PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: mpl:Mpal_0788 LemA family protein; PFAM: LemA; SPTR: LemA family protein.
       0.548
EJG06786.1
PFAM: Domain of unknown function (DUF362); COGs: COG2006 conserved hypothetical protein; InterPro IPR007160; KEGG: mpd:MCP_2535 hypothetical protein; PFAM: Protein of unknown function DUF362; SPTR: Putative uncharacterized protein.
  
     0.519
EJG06445.1
PFAM: Pyridoxamine 5'-phosphate oxidase; NADPH-dependent FMN reductase; InterPro IPR011576; KEGG: mth:MTH1484 hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Putative uncharacterized protein.
 
     0.492
EJG07003.1
PFAM: Aldo/keto reductase family; COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR001395; KEGG: mpl:Mpal_1623 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase.
 
     0.445
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.