STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06451.1Hypothetical protein; KEGG: fpl:Ferp_2079 prenyltransferase/squalene oxidase; SPTR: Prenyltransferase/squalene oxidase. (525 aa)    
Predicted Functional Partners:
EJG06452.1
Pyrrolo-quinoline quinone repeat-containing protein; PFAM: PQQ enzyme repeat; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR002372:IPR018391; KEGG: mtp:Mthe_0878 cobaltochelatase; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Hypothetical secreted protein containing PQQ enzyme repeats.
    
0.816
EJG07177.1
KEGG: mem:Memar_0640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
  0.574
EJG06453.1
Hypothetical protein.
       0.541
EJG06449.1
Hypothetical protein; InterPro IPR001680; KEGG: mem:Memar_0794 WD-40 repeat-containing protein; SPTR: WD-40 repeat-containing protein.
       0.537
EJG06450.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR001330:IPR002491; KEGG: mla:Mlab_1374 MoxR-like ATPases-like; PFAM: Periplasmic binding protein; Prenyltransferase/squalene oxidase; SPTR: Periplasmic binding protein.
      0.532
EJG07447.1
APHP domain protein; PFAM: Protein of unknown function (DUF3344); CARDB; InterPro IPR011635; KEGG: mac:MA1766 cell surface protein; PFAM: APHP; SPTR: Cell surface protein.
    
  0.513
EJG07451.1
Cell surface glycoprotein; PFAM: Protein of unknown function (DUF3344); KEGG: mpi:Mpet_0021 cell surface glycoprotein; SPTR: Cell surface glycoprotein.
    
  0.513
EJG07555.1
Hypothetical protein; KEGG: mhu:Mhun_0418 PKD; SPTR: PKD.
  
  
  0.513
EJG06355.1
KEGG: mem:Memar_2222 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.511
EJG07057.1
Carbohydrate binding family 6; InterPro IPR005084:IPR006584; KEGG: mhu:Mhun_0418 PKD; PFAM: Carbohydrate binding domain, family 6; SMART: Cellulose binding, type IV; SPTR: PKD.
  
  
  0.509
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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