Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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EJG06452.1Pyrrolo-quinoline quinone repeat-containing protein; PFAM: PQQ enzyme repeat; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR002372:IPR018391; KEGG: mtp:Mthe_0878 cobaltochelatase; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Hypothetical secreted protein containing PQQ enzyme repeats. (774 aa)    
Predicted Functional Partners:
EJG06451.1
Hypothetical protein; KEGG: fpl:Ferp_2079 prenyltransferase/squalene oxidase; SPTR: Prenyltransferase/squalene oxidase.
 
  
 
0.840
EJG08200.1
PFAM: PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: mla:Mlab_1314 hypothetical protein; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
   
 
 0.800
EJG07447.1
APHP domain protein; PFAM: Protein of unknown function (DUF3344); CARDB; InterPro IPR011635; KEGG: mac:MA1766 cell surface protein; PFAM: APHP; SPTR: Cell surface protein.
    
  0.691
EJG07451.1
Cell surface glycoprotein; PFAM: Protein of unknown function (DUF3344); KEGG: mpi:Mpet_0021 cell surface glycoprotein; SPTR: Cell surface glycoprotein.
    
  0.691
EJG07124.1
PFAM: PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: mac:MA4297 cell surface protein; PFAM: PKD; SMART: PKD; SPTR: Cell surface protein.
 
  
  0.650
hisS
PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR002314:IPR004154:IPR015807; KEGG: mem:Memar_1585 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
    0.606
EJG07767.1
Parallel beta-helix repeat protein; PFAM: Periplasmic copper-binding protein (NosD); PKD domain; TIGRFAM: parallel beta-helix repeat (two copies); COGs: COG3291 FOG: PKD repeat; InterPro IPR000601:IPR007742:IPR006626; KEGG: mhu:Mhun_0644 periplasmic copper-binding; PFAM: PKD; Periplasmic copper-binding; SMART: PKD; Parallel beta-helix repeat; SPTR: Periplasmic copper-binding protein; TIGRFAM: parallel beta-helix repeat.
 
  
  0.595
EJG06450.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR001330:IPR002491; KEGG: mla:Mlab_1374 MoxR-like ATPases-like; PFAM: Periplasmic binding protein; Prenyltransferase/squalene oxidase; SPTR: Periplasmic binding protein.
     
 0.565
EJG07903.1
PFAM: Peptidase family M50; InterPro IPR008915; KEGG: mbn:Mboo_1942 peptidase M50; PFAM: Peptidase M50; SPTR: Peptidase M50.
   
  
 0.557
EJG06453.1
Hypothetical protein.
       0.541
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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