STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ftrformylmethanofuran/tetrahydromethanopterinN-form yltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. (294 aa)    
Predicted Functional Partners:
EJG06472.1
PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; COGs: COG1229 Formylmethanofuran dehydrogenase subunit A; InterPro IPR012027:IPR013108; KEGG: mem:Memar_0619 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Formylmethanofuran dehydrogenase, subunit A; TIGRFAM: Formylmethanofuran dehydrogenase, subunit A.
 
 
 0.999
EJG06473.1
PFAM: Molybdopterin oxidoreductase; TIGRFAM: formylmethanofuran dehydrogenase subunit B; COGs: COG1029 Formylmethanofuran dehydrogenase subunit B; InterPro IPR016457:IPR006656; KEGG: mem:Memar_0620 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; SPTR: Formylmethanofuran dehydrogenase, subunit B; TIGRFAM: Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.999
EJG06960.1
PFAM: Molybdopterin oxidoreductase; TIGRFAM: formylmethanofuran dehydrogenase subunit B; COGs: COG1029 Formylmethanofuran dehydrogenase subunit B; InterPro IPR016457; KEGG: mhu:Mhun_2108 formylmethanofuran dehydrogenase, subunit B; SPTR: Formylmethanofuran dehydrogenase, subunit B; TIGRFAM: Formylmethanofuran dehydrogenase, subunit B.
 
 
 0.999
EJG06961.1
PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; COGs: COG1229 Formylmethanofuran dehydrogenase subunit A; InterPro IPR013108:IPR012027; KEGG: mem:Memar_1188 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Formylmethanofuran dehydrogenase, subunit A; TIGRFAM: Formylmethanofuran dehydrogenase, subunit A.
 
 
 0.999
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family.
 
 
 0.999
EJG06471.1
PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; COGs: COG2218 Formylmethanofuran dehydrogenase subunit C; InterPro IPR017550:IPR002489; KEGG: mem:Memar_0618 formylmethanofuran dehydrogenase; PFAM: Glutamate synthase, alpha subunit, C-terminal; SPTR: Formylmethanofuran dehydrogenase, subunit C; TIGRFAM: Formylmethanofuran dehydrogenase subunit C.
 
  
 0.997
EJG06962.1
PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; COGs: COG2218 Formylmethanofuran dehydrogenase subunit C; InterPro IPR002489:IPR017550; KEGG: mem:Memar_1189 glutamate synthase alpha subunit; PFAM: Glutamate synthase, alpha subunit, C-terminal; SPTR: Formylmethanofuran dehydrogenase, subunit C; TIGRFAM: Formylmethanofuran dehydrogenase subunit C.
 
  
 0.997
fae-hps
Bifunctional enzyme fae/hps; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family.
  
  
 0.997
mtrA
Tetrahydromethanopterin S-methyltransferase subunit G; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family.
     
 0.992
mtrA-2
Tetrahydromethanopterin S-methyltransferase, subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family.
     
 0.992
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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