STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06597.1PFAM: CBS domain; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: mem:Memar_1797 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein. (279 aa)    
Predicted Functional Partners:
EJG06600.1
PFAM: CBS domain; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: mem:Memar_1794 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Putative signal-transduction protein with CBS domains.
 
    0.951
EJG06599.1
PFAM: CBS domain; COGs: COG0517 FOG: CBS domain; InterPro IPR000644; KEGG: mpl:Mpal_2666 putative signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Putative signal transduction protein with CBS domains.
 
     0.933
EJG06598.1
PFAM: CBS domain; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: mbn:Mboo_2229 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein.
 
    
0.889
EJG06596.1
PFAM: CBS domain; InterPro IPR000644; KEGG: mem:Memar_1798 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Putative signal-transduction protein with CBS domains.
 
    
0.877
EJG06601.1
Small GTP-binding protein; PFAM: GTPase of unknown function; COGs: COG0486 GTPase; InterPro IPR002917:IPR005225; KEGG: mpl:Mpal_2664 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: Small GTP-binding protein.
 
 0.739
EJG08020.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027; KEGG: mbn:Mboo_2329 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
   0.578
EJG08102.1
PFAM: CBS domain; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: mem:Memar_0345 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Putative signal-transduction protein with CBS domains.
 
    0.567
EJG06602.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073); COGs: COG3365 conserved hypothetical protein; InterPro IPR012017; KEGG: mem:Memar_1792 hypothetical protein; PFAM: Uncharacterised conserved protein UCP004977; SPTR: Putative uncharacterized protein.
 
     0.551
EJG07827.1
GMP synthase, large subunit; PFAM: GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterPro IPR001674:IPR018318; KEGG: mem:Memar_1900 GMP synthase subunit B; PFAM: GMP synthase, C-terminal; tRNA methyl transferase-like; SPTR: GMP synthase [glutamine-hydrolyzing] subunit B; TIGRFAM: GMP synthase, C-terminal.
  
 
 0.509
EJG07396.1
Rhodanese-like protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: mem:Memar_2326 beta-lactamase domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Beta-lactamase domain protein.
  
 
 
 0.486
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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