Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG06602.1PFAM: Uncharacterized protein conserved in archaea (DUF2073); COGs: COG3365 conserved hypothetical protein; InterPro IPR012017; KEGG: mem:Memar_1792 hypothetical protein; PFAM: Uncharacterised conserved protein UCP004977; SPTR: Putative uncharacterized protein. (123 aa)    
Predicted Functional Partners:
EJG06601.1
Small GTP-binding protein; PFAM: GTPase of unknown function; COGs: COG0486 GTPase; InterPro IPR002917:IPR005225; KEGG: mpl:Mpal_2664 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: Small GTP-binding protein.
 
   
 0.989
EJG06603.1
Protein of unknown function DUF2072, Zinc-ribbon; PFAM: Zn-ribbon containing protein (DUF2072); COGs: COG3364 Zn-ribbon containing protein; InterPro IPR018645; KEGG: mem:Memar_1791 hypothetical protein; PFAM: Protein of unknown function DUF2072, Zinc-ribbon; SPTR: Putative uncharacterized protein.
 
   
 0.981
EJG07386.1
PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR017552:IPR001347; KEGG: mem:Memar_1507 sugar isomerase (SIS); PFAM: Sugar isomerase (SIS); SPTR: 3-hexulose-6-phosphate isomerase; TIGRFAM: 6-phospho 3-hexuloisomerase; manually curated.
       0.753
EJG07385.1
PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: mbn:Mboo_1200 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, class I and II.
       0.749
EJG06598.1
PFAM: CBS domain; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: mbn:Mboo_2229 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein.
       0.681
cofC
2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.679
EJG07760.1
PFAM: RNA polymerase Rpb4; COGs: COG1460 conserved hypothetical protein; InterPro IPR005574; KEGG: mpl:Mpal_0548 RNA polymerase Rpb4; PFAM: RNA polymerase II, Rpb4; SPTR: RNA polymerase Rpb4.
  
     0.662
EJG06998.1
COGs: COG3390 conserved hypothetical protein; KEGG: mem:Memar_1249 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
EJG07145.1
COGs: COG2061 ACT-domain-containing protein predicted allosteric regulator of homoserine dehydrogenase; KEGG: mbn:Mboo_1353 amino acid-binding ACT domain-containing protein; SPTR: Amino acid-binding ACT domain protein.
  
     0.631
EJG08233.1
PFAM: Protein of unknown function (DUF1616); COGs: COG4743 membrane protein; InterPro IPR011674; KEGG: mem:Memar_2405 hypothetical protein; PFAM: Protein of unknown function DUF1616; SPTR: Putative uncharacterized protein.
  
     0.629
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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