Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG06607.1KEGG: mpl:Mpal_0104 hypothetical protein; SPTR: Putative uncharacterized protein. (300 aa)    
Predicted Functional Partners:
EJG06606.1
PFAM: Protein of unknown function (DUF1628); InterPro IPR012859; KEGG: mpl:Mpal_0103 hypothetical protein; PFAM: Protein of unknown function DUF1628; SPTR: Putative uncharacterized protein.
       0.786
EJG06605.1
PFAM: Protein of unknown function (DUF1628); PA14 domain; PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601:IPR011658:IPR006558:IPR012859; KEGG: mpi:Mpet_0741 PKD domain-containing protein; PFAM: PKD; Protein of unknown function DUF1628; PA14; SMART: PKD; PA14; LamG-like jellyroll fold; SPTR: PKD domain containing protein.
       0.768
EJG06608.1
PFAM: Radical SAM superfamily; COGs: COG2108 conserved hypothetical protein related to pyruvate formate-lyase activation; InterPro IPR007197; KEGG: mem:Memar_1789 radical SAM domain-containing protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein.
       0.534
uppS
Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
       0.534
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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