STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06666.1Small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: small GTP-binding protein domain; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR002917:IPR005225; KEGG: tai:Taci_0529 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: Small GTP-binding protein; manually curated. (620 aa)    
Predicted Functional Partners:
EJG06664.1
FeoA family protein; PFAM: FeoA domain; InterPro IPR007167; KEGG: mpi:Mpet_0294 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: FeoA family protein; overlaps another CDS with the same product name.
  
  
 0.970
EJG06665.1
FeoA family protein; PFAM: FeoA domain; InterPro IPR007167; KEGG: mem:Memar_2416 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: FeoA family protein; overlaps another CDS with the same product name.
  
  
 0.970
EJG06668.1
PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: mem:Memar_2411 iron dependent repressor; PFAM: Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Iron dependent repressor.
 
  
 0.835
EJG06667.1
KEGG: mem:Memar_2413 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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