Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EJG06708.1DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: tba:TERMP_00544 nucleotidyltransferase; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein. (101 aa)    
Predicted Functional Partners:
EJG06730.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mem:Memar_1162 DNA polymerase beta subunit; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase, beta domain protein region.
  
     0.658
EJG06706.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: mem:Memar_1242 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Similarity.
 
     0.598
EJG06709.1
Hypothetical protein.
       0.522
EJG06707.1
Protein of unknown function UPF0175; PFAM: Uncharacterised protein family (UPF0175); InterPro IPR005368; KEGG: tba:TERMP_02066 hypothetical protein; PFAM: Uncharacterised protein family UPF0175; SPTR: Putative uncharacterized protein.
       0.518
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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