STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06723.1PFAM: Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345; KEGG: mem:Memar_0956 polysaccharide pyruvyl transferase; PFAM: Polysaccharide pyruvyl transferase; SPTR: Polysaccharide pyruvyl transferase. (439 aa)    
Predicted Functional Partners:
EJG06821.1
PFAM: Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345; KEGG: hau:Haur_3356 polysaccharide pyruvyl transferase; PFAM: Polysaccharide pyruvyl transferase; SPTR: Putative uncharacterized protein.
  
     0.653
EJG06720.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppd:Ppro_2460 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.
 
 
 0.552
EJG06721.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mem:Memar_0691 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.
  
 
 0.467
EJG06673.1
PFAM: Protein of unknown function DUF116; COGs: COG1852 conserved hypothetical protein; InterPro IPR002829; KEGG: mem:Memar_1695 hypothetical protein; PFAM: Protein of unknown function DUF116; SPTR: Putative uncharacterized protein.
  
     0.404
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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