STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06729.1Protein of unknown function UPF0175; PFAM: Uncharacterised protein family (UPF0175); InterPro IPR005368; KEGG: mem:Memar_1485 hypothetical protein; PFAM: Uncharacterised protein family UPF0175; SPTR: Putative uncharacterized protein. (86 aa)    
Predicted Functional Partners:
EJG06728.1
PFAM: Domain of unknown function (DUF3368); COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: srm:SRM_00226 conserved hypothetical protein containinig PIN domain (putative nucleic acid-binding protein); SPTR: Putative uncharacterized protein.
 
     0.940
EJG08165.1
KEGG: mpi:Mpet_2021 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.540
EJG07983.1
COGs: COG4983 conserved hypothetical protein; KEGG: mpi:Mpet_2021 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.534
EJG06141.1
KEGG: mpi:Mpet_2021 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.