STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06761.1NurA domain-containing protein; PFAM: NurA domain; InterPro IPR018977; KEGG: mem:Memar_1618 hypothetical protein; PFAM: NurA domain; SPTR: Putative uncharacterized protein. (341 aa)    
Predicted Functional Partners:
EJG06760.1
PFAM: Domain of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR002789; KEGG: mbn:Mboo_0937 hypothetical protein; PFAM: Protein of unknown function DUF87; SPTR: Putative uncharacterized protein.
   
 
 0.982
EJG06762.1
SMC domain protein; PFAM: RecF/RecN/SMC N terminal domain; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: mem:Memar_1617 SMC domain-containing protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: SMC domain protein.
     
 0.815
EJG06763.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: mem:Memar_1616 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase.
     
 0.801
EJG07958.1
PFAM: Domain of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR003593:IPR002789; KEGG: bph:Bphy_0246 hypothetical protein; PFAM: Protein of unknown function DUF87; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein.
   
 
 0.793
EJG06764.1
KEGG: mpi:Mpet_1029 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.548
EJG06765.1
O-phospho-L-seryl-tRNA:Cys-tRNA synthase; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)); Belongs to the SepCysS family.
       0.548
EJG06766.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: mhu:Mhun_1262 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.
       0.459
EJG07631.1
Transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339:IPR007159; KEGG: mhu:Mhun_0877 AbrB family transcriptional regulator; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB.
       0.407
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.407
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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