STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06788.1PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mem:Memar_0693 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1. (363 aa)    
Predicted Functional Partners:
EJG06787.1
Hypothetical protein.
       0.658
EJG06294.1
Dipeptidylaminopeptidase/acylaminoacyl-peptidase -likeprotein; PFAM: Putative lysophospholipase; COGs: COG1647 Esterase/lipase; KEGG: nml:Namu_1999 dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein; SPTR:Dipeptidylaminopeptidase/acylaminoacyl-peptida se-likeprotein.
   
 
 0.652
EJG08376.1
KEGG: cdl:CDR20291_1951 putative hydrolase; SPTR: Putative hydrolase.
   
 
 0.652
EJG07320.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005908:IPR005835:IPR001451; KEGG: ton:TON_1842 nucleotidyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; SPTR: Nucleotidyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, short form.
 
 
 0.647
EJG07321.1
dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: mae:Maeo_0380 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase.
  
 
 0.612
EJG06904.1
PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; KEGG: mem:Memar_0185 dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.600
EJG06371.1
Glycosyl transferase group 1; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR013534:IPR001296; KEGG: mem:Memar_1266 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; Starch synthase catalytic region; SPTR: Glycosyl transferase, group 1; overlaps another CDS with the same product name.
 
  
 
0.590
EJG06265.1
PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: mbn:Mboo_1526 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: Phosphorylase; TIGRFAM: Alpha-glucan phosphorylase.
  
 0.571
EJG06785.1
CapK related-protein; PFAM: AMP-binding enzyme; COGs: COG1541 Coenzyme F390 synthetase; KEGG: mex:Mext_3567 CapK related-protein; SPTR: CapK related-protein.
 
     0.526
EJG07566.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mpl:Mpal_1536 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.
 
 
 0.518
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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