STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06793.1PFAM: PHP domain; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR003141:IPR004013; KEGG: mem:Memar_1597 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: PHP C-terminal domain protein. (221 aa)    
Predicted Functional Partners:
EJG06794.1
COGs: COG3919 ATP-grasp protein; KEGG: mem:Memar_1598 ATP-grasp enzyme-like protein; SPTR: ATP-grasp enzyme-like protein; manually curated.
       0.799
EJG06795.1
KEGG: mbn:Mboo_1737 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.777
EJG06792.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mem:Memar_1596 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.
       0.773
EJG06791.1
KEGG: atm:ANT_26080 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.594
EJG06796.1
Methyltransferase type 11; PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: syf:Synpcc7942_1903 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein.
       0.554
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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