STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06804.1Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: mbn:Mboo_1728 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase. (242 aa)    
Predicted Functional Partners:
rpl40e
PFAM: Ribosomal L40e family; HAMAP: 50S ribosomal protein L40e; InterPro IPR001975; KEGG: mbn:Mboo_0238 50S ribosomal protein L40e; PFAM: Ribosomal protein L40e; SPTR: 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 
 0.876
EJG07889.1
PFAM: Eukaryotic translation initiation factor 2 alpha subunit; S1 RNA binding domain; COGs: COG1093 Translation initiation factor 2 alpha subunit (eIF-2alpha); InterPro IPR003029:IPR011488; KEGG: mem:Memar_2051 translation initiation factor IF-2 subunit alpha; PFAM: Eukaryotic translation initiation factor 2, alpha subunit; Ribosomal protein S1, RNA binding domain; SPTR: Translation initiation factor 2 subunit alpha (AeIF-2a).
   
 0.864
EJG06449.1
Hypothetical protein; InterPro IPR001680; KEGG: mem:Memar_0794 WD-40 repeat-containing protein; SPTR: WD-40 repeat-containing protein.
  
 0.827
EJG06942.1
PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: mpl:Mpal_1053 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein.
 
 
 0.824
EJG06601.1
Small GTP-binding protein; PFAM: GTPase of unknown function; COGs: COG0486 GTPase; InterPro IPR002917:IPR005225; KEGG: mpl:Mpal_2664 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: Small GTP-binding protein.
   
 0.806
EJG06575.1
PFAM: WD domain, G-beta repeat; PEGA domain; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781:IPR013229:IPR001680:IPR018391; KEGG: shc:Shell_0491 serine/threonine protein kinase with WD40 repeats; PFAM: PEGA; WD40 repeat, subgroup; SPTR: Putative WD domain, G-beta repeat.
   
 0.792
EJG07294.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR018391:IPR019781; KEGG: mem:Memar_0794 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; WD40 repeat; SPTR: WD-40 repeat-containing protein.
   
 0.792
EJG06038.1
PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: mpi:Mpet_2549 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein.
   
 0.754
EJG06325.1
Proline-specific peptidase; Cleaves H-Pro-AMC as well as a wide spectrum of amino acid substrates and several peptide substrates without a proline at the N- terminus.
   
 0.754
dnaK
Chaperone protein dnaK; Acts as a chaperone.
   
 
 0.739
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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