STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06948.1(NiFe)-hydrogenase-3-type complex Eha, membrane protein EhaE; PFAM: Predicted membrane protein (DUF2107); InterPro IPR011317; KEGG: mem:Memar_1175 hypothetical protein; PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaE; SPTR: Membrane-bound hydrogenase subunit ehaE. (78 aa)    
Predicted Functional Partners:
EJG06945.1
COGs: COG4041 membrane protein; KEGG: mem:Memar_1172 hypothetical protein; SPTR: Membrane-bound hydrogenase subunit ehaB.
  
    0.991
EJG06949.1
(NiFe)-hydrogenase-3-type complex Eha, membrane protein EhaF; PFAM: Predicted membrane protein (DUF2106); COGs: COG4037 membrane protein; InterPro IPR011313; KEGG: mem:Memar_1176 hypothetical protein; PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaF; SPTR: Membrane-bound hydrogenase subunit ehaF.
  
  
 0.991
EJG06951.1
(NiFe)-hydrogenase-3-type complex Eha, membrane protein EhaH; PFAM: NADH dehydrogenase I, subunit N related protein; COGs: COG4078 membrane protein; InterPro IPR017059; KEGG: mem:Memar_1178 NADH dehydrogenase I, subunit N related protein; PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaH, predicted; SPTR: Membrane-bound hydrogenase subunit ehaH.
  
    0.965
EJG06946.1
Protein of unknown function DUF2109, membrane; PFAM: Predicted membrane protein (DUF2109); InterPro IPR019214; KEGG: mem:Memar_1173 hypothetical protein; PFAM: Protein of unknown function DUF2109, membrane; SPTR: Membrane-bound hydrogenase subunit ehaC.
  
    0.950
EJG06950.1
Protein of unknown function DUF2105, membrane; PFAM: Predicted membrane protein (DUF2105); COGs: COG4036 membrane protein; InterPro IPR019212; KEGG: mem:Memar_1177 uncharacterized membrane protein; PFAM: Protein of unknown function DUF2105, membrane; SPTR: Membrane-bound hydrogenase subunit ehaG.
  
    0.950
EJG06947.1
Protein of unknown function DUF2108, membrane; PFAM: Predicted membrane protein (DUF2108); InterPro IPR019213; KEGG: mem:Memar_1174 hypothetical protein; PFAM: Protein of unknown function DUF2108, membrane; SPTR: Membrane-bound hydrogenase subunit ehaD.
       0.940
EJG06955.1
KEGG: mem:Memar_1182 hypothetical protein; SPTR: Membrane-bound hydrogenase subunit ehaL.
  
    0.888
EJG06956.1
PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137; KEGG: mpi:Mpet_1200 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; SPTR: NADH ubiquinone oxidoreductase 20 kDa subunit.
  
    0.877
EJG06953.1
PFAM: NADH dehydrogenase; COGs: COG0650 Formate hydrogenlyase subunit 4; InterPro IPR001694; KEGG: mem:Memar_1180 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; SPTR: Membrane-bound hydrogenase subunit ehaJ.
  
    0.871
EJG06957.1
NADH-ubiquinone oxidoreductase chain 49kDa; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001135; KEGG: mem:Memar_1184 NADH dehydrogenase (ubiquinone); PFAM: NADH-quinone oxidoreductase, subunit D; SPTR: Membrane-bound hydrogenase subunit ehaO.
       0.844
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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