STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJG06974.1PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mpi:Mpet_1231 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1. (354 aa)    
Predicted Functional Partners:
EJG06973.1
KH-domain/beta-lactamase-domain protein; PFAM: KH domain; Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; TIGRFAM: arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein; COGs: COG1782 metal-dependent RNase consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; InterPro IPR018111:IPR011108:IPR019975; KEGG: mpl:Mpal_0777 beta-lactamase domain protein; PFAM: RNA-metabolising metallo-beta-lactamase; K Homology, type 1, subgroup; SPTR: Beta-lactamase domain protein; TIGRFAM: KH-domain/beta-lactamase-domain pro [...]
       0.936
psmB
Proteasome endopeptidase complex, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
       0.846
EJG06975.1
KEGG: mpl:Mpal_1001 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.746
EJG07322.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family (UPF0153); InterPro IPR005358; KEGG: mpl:Mpal_2098 protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein.
  
  
 0.700
EJG06490.1
KEGG: mbn:Mboo_0601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.697
EJG07638.1
Hypothetical protein; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; KEGG: mem:Memar_1732 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.653
EJG06355.1
KEGG: mem:Memar_2222 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.634
EJG06076.1
KEGG: mem:Memar_0063 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.606
EJG07526.1
Hypothetical protein; PFAM: CARDB; KEGG: mem:Memar_1820 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.605
EJG07634.1
PFAM: Protein of unknown function (DUF447); COGs: COG2457 conserved hypothetical protein; InterPro IPR007386; KEGG: mpi:Mpet_0996 hypothetical protein; PFAM: Protein of unknown function DUF447; SPTR: Putative uncharacterized protein.
  
     0.605
Your Current Organism:
Methanofollis liminatans
NCBI taxonomy Id: 28892
Other names: M. liminatans DSM 4140, Methanofollis liminatans DSM 4140, Methanofollis liminatans GKZPZ, Methanofollis liminatans str. DSM 4140, Methanofollis liminatans strain DSM 4140, Methanogenium liminatans (DSM 4140), Methanogenium liminatans DSM 4140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.